About Gene List

PF3D7_1239300

Genome location: Pf3D7_12_v3:1,644,546..1,646,283(+)

Genome classification: Core

Function and Localization

Product Description: zinc finger protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 2

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.08 0.96
Trophozoite expressed 0.06 0.96
Schizont possibly expressed 0.01 0.99
Gametocyte not expressed 0.05 0.97

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1239300

Resistome Missense Mutations: D28N

Resistome Compounds with Missense Mutations: Cipargamin/KAE609/NITD609

Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.298 | MFS: -3.531 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1453800)

Modification: Other | RMgm-459

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I530

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_148538

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 14 8 14
disruptive 3 16 12 33
missense 3 16 11 30

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 21 11 21
disruptive 6 45 22 43
missense 6 36 21 34

PlasmoDB Total SNPs: 127

Non-coding: 116 | Synonymous: 7 | Nonsynonymous: 4 | Stop Codon: 0

Protein Information

Protein Length: 205 | Molecular Weight (kDa): 24.215

UniProt ID(s): Q8I530

PDB ID(s): None

Isoelectric Point: 7.78

Protein Domain Annotations:

Source Family ID Description
InterPro IPR019786 Zinc finger, PHD-type, conserved site
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097