About Gene List

PF3D7_1242300

Genome location: Pf3D7_12_v3:1,793,174..1,795,330(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium membrane protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 3

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.03 0.98
Trophozoite expressed 0.27 0.82
Schizont expressed 0.15 0.90
Gametocyte expressed 0.29 0.82

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1242300

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.924 | MFS: -2.219 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I506

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533254

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 14 4 7
disruptive 2 8 6 23
missense 2 8 6 23

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 3 23 6 13
disruptive 3 24 24 46
missense 3 21 20 31

PlasmoDB Total SNPs: 105

Non-coding: 83 | Synonymous: 19 | Nonsynonymous: 3 | Stop Codon: 0

Protein Information

Protein Length: 186 | Molecular Weight (kDa): 22.132

UniProt ID(s): Q8I506

PDB ID(s): None

Isoelectric Point: 8.54

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097