About Gene List

PF3D7_1245500

Genome location: Pf3D7_12_v3:1,896,842..1,899,867(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.12 0.94
Trophozoite not expressed 0.35 0.80
Schizont not expressed 0.59 0.67
Gametocyte possibly expressed 0.52 0.72

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1245500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.472 | MFS: -2.662 | #Insertions: 0

PlasmoGEM Phenotype: Slow (Pb ortholog: PBANKA_1458700)

  • Relative Growth Rate: 0.77 ± 0.21
  • Confidence: 4.53

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1458700)

Modification: Disrupted | RMgm-4028

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A144A322

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533748

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 24 8 27
disruptive 5 33 26 72
missense 5 30 24 60

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 5 50 22 27
disruptive 24 107 44 104
missense 12 82 32 76

PlasmoDB Total SNPs: 276

Non-coding: 233 | Synonymous: 26 | Nonsynonymous: 15 | Stop Codon: 2

Protein Information

Protein Length: 460 | Molecular Weight (kDa): 56.209

UniProt ID(s): A0A144A322

PDB ID(s): None

Isoelectric Point: 9.81

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097