Product Description: ankyrin-repeat protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 0.16 | 0.92 |
| Trophozoite | expressed | 0.23 | 0.86 |
| Schizont | possibly expressed | 0.02 | 0.99 |
| Gametocyte | not expressed | 0.15 | 0.91 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1245900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.988 | MFS: -2.179 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8I4X3
"Best" AlphaFill ligand hit: PNM (open form - penicillin g, Local RMSD=0.17) with 5CED (Global RMSD=2.58)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 1 | 14 | 10 | 20 |
| disruptive | 4 | 24 | 17 | 47 |
| missense | 3 | 24 | 17 | 44 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 35 | 12 | 14 |
| disruptive | 11 | 57 | 32 | 70 |
| missense | 7 | 52 | 28 | 55 |
PlasmoDB Total SNPs: 56
Non-coding: 30 | Synonymous: 18 | Nonsynonymous: 8 | Stop Codon: 0
Protein Length: 311 | Molecular Weight (kDa): 36.442
UniProt ID(s): Q8I4X3
PDB ID(s): None
Isoelectric Point: 4.96
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR002110 | Ankyrin repeat |
| InterPro | IPR020683 | Ankyrin repeat-containing domain |
| InterPro | IPR036770 | Ankyrin repeat-containing domain superfamily |
| PFam | PF12796 | Ankyrin repeat-containing domain |
| Superfamily | SSF48403 | Ankyrin repeat-containing domain superfamily |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |