About Gene List

PF3D7_1245900

Genome location: Pf3D7_12_v3:1,910,557..1,912,208(+)

Genome classification: Core

Function and Localization

Product Description: ankyrin-repeat protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.16 0.92
Trophozoite expressed 0.23 0.86
Schizont possibly expressed 0.02 0.99
Gametocyte not expressed 0.15 0.91

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1245900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.988 | MFS: -2.179 | #Insertions: 3

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I4X3

"Best" AlphaFill ligand hit: PNM (open form - penicillin g, Local RMSD=0.17) with 5CED (Global RMSD=2.58)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_109437

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 14 10 20
disruptive 4 24 17 47
missense 3 24 17 44

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 35 12 14
disruptive 11 57 32 70
missense 7 52 28 55

PlasmoDB Total SNPs: 56

Non-coding: 30 | Synonymous: 18 | Nonsynonymous: 8 | Stop Codon: 0

Protein Information

Protein Length: 311 | Molecular Weight (kDa): 36.442

UniProt ID(s): Q8I4X3

PDB ID(s): None

Isoelectric Point: 4.96

Protein Domain Annotations:

Source Family ID Description
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR036770 Ankyrin repeat-containing domain superfamily
PFam PF12796 Ankyrin repeat-containing domain
Superfamily SSF48403 Ankyrin repeat-containing domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097