About Gene List

PF3D7_1250900

Genome location: Pf3D7_12_v3:2,083,353..2,084,625(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.31 0.85
Trophozoite expressed 0.72 0.60
Schizont expressed 0.14 0.91
Gametocyte possibly expressed 0.33 0.81

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1250900

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.999 | MFS: -1.446 | #Insertions: 3

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8I4S5

"Best" AlphaFill ligand hit: AGS (phosphothiophosphoric acid-adenylate ester, Local RMSD=7.10) with 5O0Y (Global RMSD=20.48)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533245

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 6 19 5 13
disruptive 6 28 19 54
missense 5 26 18 45

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 30 12 13
disruptive 15 80 29 71
missense 7 65 23 56

PlasmoDB Total SNPs: 54

Non-coding: 26 | Synonymous: 19 | Nonsynonymous: 9 | Stop Codon: 0

Protein Information

Protein Length: 321 | Molecular Weight (kDa): 38.89

UniProt ID(s): Q8I4S5

PDB ID(s): None

Isoelectric Point: 10.13

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097