About Gene List

PF3D7_1251000

Genome location: Pf3D7_12_v3:2,085,370..2,086,959(-)

Genome classification: Core

Function and Localization

Product Description: HSP20-like chaperone, putative

SignalP Peptide: MTNILLFFNILWMSTLFVSA

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005737 cytoplasm
Component GO:0005829 cytosol
Component GO:0005634 nucleus
Function GO:0051879 Hsp90 protein binding
Function GO:0051087 chaperone binding
Process GO:0051131 chaperone-mediated protein complex assembly
Process GO:0006457 protein folding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.01 1.00
Trophozoite not expressed 0.00 1.00
Schizont not expressed 0.00 1.00
Gametocyte expressed 0.20 0.88

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1251000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 0.985 | MFS: -2.812 | #Insertions: 1

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A144A1J3

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_215366

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 0 14 5 9
disruptive 3 11 5 23
missense 3 11 5 22

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 1 26 9 12
disruptive 5 33 17 47
missense 4 26 15 35

PlasmoDB Total SNPs: 111

Non-coding: 105 | Synonymous: 4 | Nonsynonymous: 2 | Stop Codon: 0

Protein Information

Protein Length: 186 | Molecular Weight (kDa): 21.997

UniProt ID(s): A0A144A1J3

PDB ID(s): None

Isoelectric Point: 9.26

Protein Domain Annotations:

Source Family ID Description
InterPro IPR007052 CS domain
InterPro IPR008978 HSP20-like chaperone
PFam PF04969 CS domain
Superfamily SSF49764 HSP20-like chaperone

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097