Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016020 | membrane |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.00 | 1.00 |
Trophozoite | not expressed | 0.00 | 1.00 |
Schizont | not expressed | 0.00 | 1.00 |
Gametocyte | expressed | 0.19 | 0.90 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1302400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.344 | MFS: -2.742 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H596
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 7 | 6 | 8 |
disruptive | 3 | 10 | 11 | 17 |
missense | 3 | 10 | 11 | 15 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 15 | 11 | 12 |
disruptive | 8 | 27 | 21 | 46 |
missense | 5 | 21 | 18 | 36 |
PlasmoDB Total SNPs: 109
Non-coding: 100 | Synonymous: 5 | Nonsynonymous: 4 | Stop Codon: 0
Protein Length: 163 | Molecular Weight (kDa): 18.519
UniProt ID(s): C0H596
PDB ID(s): None
Isoelectric Point: 8.91
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |