Product Description: conserved protein, unknown function
SignalP Peptide: MKLSLVIFCIVIIFFKENIS
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.03 | 0.99 |
Trophozoite | expressed | 0.36 | 0.77 |
Schizont | expressed | 0.14 | 0.90 |
Gametocyte | expressed | 0.12 | 0.93 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1306200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.148 | MFS: -3.248 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1404700)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IEQ3
"Best" AlphaFill ligand hit: TBR (dodecabromohexatantalum, Local RMSD=0.09) with 2BVL (Global RMSD=14.57)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 26 | 11 | 25 |
disruptive | 10 | 40 | 26 | 73 |
missense | 10 | 40 | 26 | 66 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 42 | 21 | 48 |
disruptive | 16 | 108 | 50 | 102 |
missense | 14 | 94 | 38 | 78 |
PlasmoDB Total SNPs: 112
Non-coding: 82 | Synonymous: 19 | Nonsynonymous: 10 | Stop Codon: 1
Protein Length: 478 | Molecular Weight (kDa): 56.811
UniProt ID(s): Q8IEQ3
PDB ID(s): None
Isoelectric Point: 9.99
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR029058 | Alpha/Beta hydrolase fold |
PFam | N/A | N/A |
Superfamily | SSF53474 | Alpha/Beta hydrolase fold |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |