About Gene List

PF3D7_1308000

Genome location: Pf3D7_13_v3:355,912..359,788(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium membrane protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 4

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.06 0.97
Trophozoite not expressed 0.28 0.84
Schizont expressed 1.93 0.25
Gametocyte not expressed 0.51 0.71

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1308000

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 4 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.166 | MFS: -2.924 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H5A5

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533548

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 40 27 48
disruptive 24 98 57 137
missense 17 76 51 113

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 15 70 33 65
disruptive 57 225 104 251
missense 31 171 88 164

PlasmoDB Total SNPs: 152

Non-coding: 83 | Synonymous: 44 | Nonsynonymous: 25 | Stop Codon: 0

Protein Information

Protein Length: 830 | Molecular Weight (kDa): 100.013

UniProt ID(s): C0H5A5

PDB ID(s): None

Isoelectric Point: 5.64

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

No associated publications