Product Description: TMEM238 domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 14
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016020 | membrane |
Process | GO:0055074 | calcium ion homeostasis |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.02 | 0.99 |
Trophozoite | possibly expressed | 0.04 | 0.97 |
Schizont | expressed | 0.71 | 0.63 |
Gametocyte | not expressed | 0.30 | 0.83 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1313500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.19 | MFS: -2.723 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IEH8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 72 | 43 | 105 |
disruptive | 74 | 253 | 157 | 351 |
missense | 60 | 223 | 127 | 298 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 22 | 149 | 74 | 125 |
disruptive | 128 | 600 | 266 | 547 |
missense | 95 | 469 | 215 | 366 |
PlasmoDB Total SNPs: 201
Non-coding: 43 | Synonymous: 71 | Nonsynonymous: 85 | Stop Codon: 2
Protein Length: 1737 | Molecular Weight (kDa): 209.075
UniProt ID(s): Q8IEH8
PDB ID(s): None
Isoelectric Point: 7.34
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR029365 | TMEM238 protein |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |