About Gene List

PF3D7_1313500

Genome location: Pf3D7_13_v3:573,169..578,639(-)

Genome classification: Core

Function and Localization

Product Description: TMEM238 domain-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 14

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0016020 membrane
Process GO:0055074 calcium ion homeostasis

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.02 0.99
Trophozoite possibly expressed 0.04 0.97
Schizont expressed 0.71 0.63
Gametocyte not expressed 0.30 0.83

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1313500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.19 | MFS: -2.723 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IEH8

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_105151

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 9 72 43 105
disruptive 74 253 157 351
missense 60 223 127 298

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 22 149 74 125
disruptive 128 600 266 547
missense 95 469 215 366

PlasmoDB Total SNPs: 201

Non-coding: 43 | Synonymous: 71 | Nonsynonymous: 85 | Stop Codon: 2

Protein Information

Protein Length: 1737 | Molecular Weight (kDa): 209.075

UniProt ID(s): Q8IEH8

PDB ID(s): None

Isoelectric Point: 7.34

Protein Domain Annotations:

Source Family ID Description
InterPro IPR029365 TMEM238 protein
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104