Product Description: conserved protein, unknown function
SignalP Peptide: MNMNLVLFISLICLFFGCSNKLYA
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.01 | 1.00 |
Schizont | not expressed | 0.01 | 0.99 |
Gametocyte | expressed | 0.26 | 0.86 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1316700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.721 | MFS: -2.79 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8Q0
"Best" AlphaFill ligand hit: PH2 (2-amino-6-hydroxymethyl-7,8-dihydro-3h-pteridin-4-one, Local RMSD=0.62) with 3MCO (Global RMSD=22.22)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 40 | 19 | 52 |
disruptive | 10 | 71 | 40 | 87 |
missense | 9 | 70 | 37 | 86 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 72 | 43 | 45 |
disruptive | 18 | 135 | 61 | 149 |
missense | 15 | 126 | 55 | 136 |
PlasmoDB Total SNPs: 51
Non-coding: 21 | Synonymous: 13 | Nonsynonymous: 17 | Stop Codon: 0
Protein Length: 623 | Molecular Weight (kDa): 73.388
UniProt ID(s): A0A5K1K8Q0
PDB ID(s): None
Isoelectric Point: 7.13
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
PFam | N/A | N/A |
Superfamily | SSF49899 | Concanavalin A-like lectin/glucanase domain superfamily |
No associated publications