About Gene List

PF3D7_1317600

Genome location: Pf3D7_13_v3:734,806..738,618(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0005634 nucleus

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring expressed 0.18 0.92
Trophozoite expressed 0.46 0.72
Schizont expressed 0.14 0.91
Gametocyte expressed 0.26 0.85

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1317600

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.126 | MFS: -3.042 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1416100)

  • Relative Growth Rate: 0.09 ± 0.07
  • Confidence: 6.75

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C0H5C1

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533057

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 21 15 38
disruptive 17 82 44 102
missense 15 78 41 94

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 62 29 41
disruptive 29 169 76 187
missense 22 143 59 126

PlasmoDB Total SNPs: 210

Non-coding: 148 | Synonymous: 33 | Nonsynonymous: 29 | Stop Codon: 0

Protein Information

Protein Length: 620 | Molecular Weight (kDa): 73.866

UniProt ID(s): C0H5C1

PDB ID(s): None

Isoelectric Point: 8.18

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
23181666 Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. Oehring SC, Woodcroft BJ, ..., Voss TS 10.1186/gb-2012-13-11-r108