Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 5
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0016020 | membrane |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | possibly expressed | N/A | N/A |
| Ring | not expressed | 0.74 | 0.68 |
| Trophozoite | not expressed | 1.13 | 0.47 |
| Schizont | possibly expressed | 0.49 | 0.74 |
| Gametocyte | possibly expressed | 1.71 | 0.27 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1324300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 9 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.063 | #Insertions: 22
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1339500)
Modification: Disrupted | RMgm-3589
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 48 | 212 | 135 | 280 |
| disruptive | 345 | 772 | 377 | 947 |
| missense | 182 | 577 | 312 | 752 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 96 | 415 | 200 | 318 |
| disruptive | 618 | 1571 | 686 | 1516 |
| missense | 303 | 1113 | 530 | 1016 |
PlasmoDB Total SNPs: 930
Non-coding: 110 | Synonymous: 346 | Nonsynonymous: 466 | Stop Codon: 8
Protein Length: 5415 | Molecular Weight (kDa): 658.972
UniProt ID(s): Q8IE74
PDB ID(s): None
Isoelectric Point: 9.75
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |