Product Description: ATF7-int domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.15 | 0.92 |
Trophozoite | not expressed | 0.19 | 0.88 |
Schizont | not expressed | 0.52 | 0.76 |
Gametocyte | not expressed | 0.20 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1331500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.339 | MFS: -2.627 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1346400)
Modification: Disrupted | RMgm-3622
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8J9
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersOrthology to BindingDB Entries:
UniProt | Protein Name | Species | Homology Source | BindingDB Ligands |
---|---|---|---|---|
P0C6X4 | Replicase polyprotein 1ab | OrthoMCL BLAST | cmdc.202100576, 6bUS9975885, Compound 6US9975885, Compound 13US9975885, Compound 14... |
Protein Length: 620 | Molecular Weight (kDa): 73.705
UniProt ID(s): A0A5K1K8J9
PDB ID(s): None
Isoelectric Point: 4.74
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR026085 | Activating transcription factor 7-interacting protein |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 17 | 12 | 32 |
disruptive | 25 | 74 | 39 | 109 |
missense | 19 | 54 | 34 | 93 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 9 | 38 | 24 | 41 |
disruptive | 49 | 177 | 70 | 164 |
missense | 29 | 122 | 55 | 118 |
PlasmoDB Total SNPs: 282
Non-coding: 135 | Synonymous: 78 | Nonsynonymous: 69 | Stop Codon: 0
No associated publications