Genome location: Pf3D7_13_v3:1,408,270..1,410,124(-)
Genome classification: Core
Product Description: MSP7-like protein
SignalP Peptide: MIKGLIFYLFICFFVFFVHA
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.08 | 0.96 |
| Trophozoite | possibly expressed | 0.19 | 0.88 |
| Schizont | expressed | 0.30 | 0.81 |
| Gametocyte | not expressed | 0.09 | 0.94 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1334600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.12 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H5F3
"Best" AlphaFill ligand hit: M77 (5-(1,4-diazepan-1-sulfonyl)isoquinoline, Local RMSD=1.60) with 2ESM (Global RMSD=15.48)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 8 | 4 | 11 |
| disruptive | 9 | 40 | 31 | 39 |
| missense | 8 | 39 | 29 | 35 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 13 | 8 | 18 |
| disruptive | 20 | 78 | 39 | 66 |
| missense | 16 | 71 | 36 | 50 |
PlasmoDB Total SNPs: 55
Non-coding: 28 | Synonymous: 10 | Nonsynonymous: 15 | Stop Codon: 2
Protein Length: 298 | Molecular Weight (kDa): 34.958
UniProt ID(s): C0H5F3, C5HER3, C5HER5, C5HER6, C5HER7, C5HES2, C5HES3, C5HES4, C5HES6, C5HES7, C5HET0
PDB ID(s): None
Isoelectric Point: 5.76
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | IPR024781 | Merozoite surface protein, C-terminal |
| PFam | PF12948 | Merozoite surface protein, C-terminal |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 20472690 | Systematic genetic analysis of the Plasmodium falciparum MSP7-like family revealsdifferences in protein expression, location, and importance in asexual growth ofthe blood-stage parasite | Kadekoppala M, Ogun SA, ..., Holder AA | 10.1128/EC.00048-10 |