About Gene List

PF3D7_1335800

Genome location: Pf3D7_13_v3:1,462,045..1,464,260(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.11 0.95
Trophozoite possibly expressed 0.87 0.54
Schizont possibly expressed 0.53 0.69
Gametocyte not expressed 0.60 0.67

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1335800

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -1.926 | #Insertions: 2

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1349700)

  • Relative Growth Rate: 0.95 ± 0.17
  • Confidence: 4.93

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1349700)

Modification: Disrupted | RMgm-3641

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IDX2

"Best" AlphaFill ligand hit: ACP (adenosine-5'-[beta, gamma-methylene]triphosphate, Local RMSD=0.09) with 2HCB (Global RMSD=21.15)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533380

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 8 6 18
disruptive 10 34 22 58
missense 9 34 19 55

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 15 10 25
disruptive 23 89 54 124
missense 15 69 46 94

PlasmoDB Total SNPs: 64

Non-coding: 25 | Synonymous: 19 | Nonsynonymous: 19 | Stop Codon: 1

Protein Information

Protein Length: 603 | Molecular Weight (kDa): 73.596

UniProt ID(s): Q8IDX2

PDB ID(s): None

Isoelectric Point: 8.78

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
16267556 A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, Vignali M, ..., Hughes RE 10.1038/nature04104