About Gene List

PF3D7_1338900

Genome location: Pf3D7_13_v3:1,568,367..1,571,577(-)

Genome classification: Core

Function and Localization

Product Description: serine/threonine protein kinase, putative

SignalP Peptide: N/A

# Transmembrane Domains: 1

EC Numbers: 2.7.11.1 (Non-specific serine/threonine protein kinase)

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring not expressed 0.09 0.96
Trophozoite expressed 0.67 0.63
Schizont expressed 0.40 0.76
Gametocyte expressed 1.08 0.47

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1338900

Resistome Missense Mutations: N355K, N358K

Resistome Compounds with Missense Mutations: AN13762

Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.276 | MFS: -2.61 | #Insertions: 0

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1352600)

  • Relative Growth Rate: 1.00 ± 0.04
  • Confidence: 7.70

RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1352600)

Modification: Disrupted | RMgm-3658

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A5K1K8V9

"Best" AlphaFill ligand hit: AMP (adenosine monophosphate, Local RMSD=0.14) with 3GC0 (Global RMSD=6.05)

BRENDA EC Inhibitors:

EC # Name EC Inhibitors
2.7.11.1 non-specific serine/threonine protein kinase ATPKClDTTP53DRBEDTATBCAKN-93K252aCKI-7LAALSTAACS...

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_114875

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 7 39 32 67
disruptive 28 140 81 160
missense 23 127 81 144

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 13 85 41 74
disruptive 73 278 113 232
missense 45 239 104 183

PlasmoDB Total SNPs: 145

Non-coding: 69 | Synonymous: 37 | Nonsynonymous: 39 | Stop Codon: 0

Protein Information

Protein Length: 931 | Molecular Weight (kDa): 111.339

UniProt ID(s): A0A5K1K8V9

PDB ID(s): None

Isoelectric Point: 9.87

Protein Domain Annotations:

Source Family ID Description
InterPro IPR000719 Protein kinase domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
InterPro IPR011009 Protein kinase-like domain superfamily
InterPro IPR017441 Protein kinase, ATP binding site
PFam PF00069 Protein kinase domain
Superfamily SSF56112 Protein kinase-like domain superfamily

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895