Genome location: Pf3D7_13_v3:1,596,717..1,597,962(-)
Genome classification: Core
Product Description: mitotic-spindle organizing protein 1, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005813 | centrosome |
Component | GO:0008274 | gamma-tubulin ring complex |
Component | GO:0031021 | interphase microtubule organizing center |
Component | GO:0005634 | nucleus |
Component | GO:0005819 | spindle |
Process | GO:0051415 | microtubule nucleation by interphase microtubule organizing center |
Process | GO:0090307 | mitotic spindle assembly |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.15 | 0.90 |
Schizont | not expressed | 0.07 | 0.95 |
Gametocyte | not expressed | 0.33 | 0.80 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1339800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 0.279 | MFS: -3.996 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IDT7
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_104170
Most Similar Human Ortholog: Q08AG7
TM-align score: 0.87 | RMSD: 1.26
Seq Identity: 0.37 | Length: 68 / 72
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000204899 | mitotic spindle organizing protein 1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 119
Non-coding: 116 | Synonymous: 0 | Nonsynonymous: 2 | Stop Codon: 1
Protein Length: 72 | Molecular Weight (kDa): 8.412
UniProt ID(s): Q8IDT7
PDB ID(s): None
Isoelectric Point: 5.81
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR022214 | Mitotic-spindle organizing protein 1 |
PFam | PF12554 | Mitotic-spindle organizing protein 1 |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
23181666 | Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. | Oehring SC, Woodcroft BJ, ..., Voss TS | 10.1186/gb-2012-13-11-r108 |