Genome location: Pf3D7_13_v3:1,645,735..1,648,368(-)
Genome classification: Core
Product Description: inner membrane complex protein 1k, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0070258 | inner membrane pellicle complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 0.99 |
Trophozoite | not expressed | 0.02 | 0.99 |
Schizont | possibly expressed | 0.23 | 0.84 |
Gametocyte | expressed | 0.49 | 0.74 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1341800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.269 | MFS: -2.726 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PY17X_1360600)
Modification: Tagged | RMgm-4495
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IDS1
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 17 | 14 | 36 |
disruptive | 10 | 53 | 31 | 80 |
missense | 10 | 52 | 31 | 77 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 42 | 18 | 34 |
disruptive | 20 | 113 | 51 | 140 |
missense | 19 | 105 | 42 | 106 |
PlasmoDB Total SNPs: 173
Non-coding: 148 | Synonymous: 11 | Nonsynonymous: 14 | Stop Codon: 0
Protein Length: 462 | Molecular Weight (kDa): 53.721
UniProt ID(s): Q8IDS1
PDB ID(s): None
Isoelectric Point: 4.74
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR022086 | Inner membrane complex protein |
PFam | PF12314 | Inner membrane complex protein |
Superfamily | N/A | N/A |
No associated publications