Product Description: conserved protein, unknown function
SignalP Peptide: MCNLFLNRKIILCTLYLVCLKFGHVLN
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | expressed | 0.21 | 0.85 |
Schizont | expressed | 0.10 | 0.93 |
Gametocyte | expressed | 0.17 | 0.89 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1343500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.12 | MFS: -3.21 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8C4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 21 | 8 | 18 |
disruptive | 5 | 24 | 18 | 43 |
missense | 5 | 24 | 18 | 41 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 33 | 6 | 24 |
disruptive | 8 | 62 | 24 | 76 |
missense | 8 | 57 | 19 | 63 |
PlasmoDB Total SNPs: 162
Non-coding: 136 | Synonymous: 18 | Nonsynonymous: 8 | Stop Codon: 0
Protein Length: 307 | Molecular Weight (kDa): 37.019
UniProt ID(s): A0A5K1K8C4
PDB ID(s): None
Isoelectric Point: 10.4
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR003795 | Protein of unknown function DUF192 |
PFam | PF02643 | Protein of unknown function DUF192 |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |