About Gene List

PF3D7_1343500

Genome location: Pf3D7_13_v3:1,719,474..1,721,883(+)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: MCNLFLNRKIILCTLYLVCLKFGHVLN

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.02 0.99
Trophozoite expressed 0.21 0.85
Schizont expressed 0.10 0.93
Gametocyte expressed 0.17 0.89

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1343500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.12 | MFS: -3.21 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A5K1K8C4

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_139477

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 21 8 18
disruptive 5 24 18 43
missense 5 24 18 41

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 6 33 6 24
disruptive 8 62 24 76
missense 8 57 19 63

PlasmoDB Total SNPs: 162

Non-coding: 136 | Synonymous: 18 | Nonsynonymous: 8 | Stop Codon: 0

Protein Information

Protein Length: 307 | Molecular Weight (kDa): 37.019

UniProt ID(s): A0A5K1K8C4

PDB ID(s): None

Isoelectric Point: 10.4

Protein Domain Annotations:

Source Family ID Description
InterPro IPR003795 Protein of unknown function DUF192
PFam PF02643 Protein of unknown function DUF192
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895