Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.25 | 0.89 |
| Trophozoite | expressed | 1.37 | 0.37 |
| Schizont | expressed | 0.54 | 0.73 |
| Gametocyte | expressed | 2.47 | 0.16 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1348400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.156 | MFS: -2.777 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 28 | 188 | 125 | 268 |
| disruptive | 156 | 617 | 298 | 747 |
| missense | 107 | 492 | 261 | 635 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 63 | 386 | 154 | 286 |
| disruptive | 301 | 1268 | 520 | 1050 |
| missense | 187 | 1002 | 430 | 740 |
PlasmoDB Total SNPs: 662
Non-coding: 58 | Synonymous: 333 | Nonsynonymous: 271 | Stop Codon: 0
Protein Length: 3855 | Molecular Weight (kDa): 460.859
UniProt ID(s): A0A5K1K8R0
PDB ID(s): None
Isoelectric Point: 7.56
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |