Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | possibly expressed | N/A | N/A |
| Ring | not expressed | 0.01 | 0.99 |
| Trophozoite | not expressed | 0.12 | 0.92 |
| Schizont | not expressed | 0.02 | 0.99 |
| Gametocyte | not expressed | 0.18 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1349900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.924 | MFS: -2.171 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1362700)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K985
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 2 | 14 | 7 | 14 |
| disruptive | 4 | 25 | 13 | 35 |
| missense | 3 | 18 | 11 | 33 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 4 | 26 | 10 | 10 |
| disruptive | 7 | 53 | 27 | 42 |
| missense | 4 | 38 | 22 | 31 |
PlasmoDB Total SNPs: 32
Non-coding: 12 | Synonymous: 15 | Nonsynonymous: 5 | Stop Codon: 0
Protein Length: 186 | Molecular Weight (kDa): 22.402
UniProt ID(s): A0A5K1K985
PDB ID(s): None
Isoelectric Point: 9.64
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |