Genome location: Pf3D7_13_v3:2,202,011..2,205,513(-)
Genome classification: Core
Product Description: PhIL1 interacting protein PIP1
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0070258 | inner membrane pellicle complex |
Function | GO:0005515 | protein binding |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.97 |
Trophozoite | not expressed | 0.09 | 0.95 |
Schizont | not expressed | 0.02 | 0.99 |
Gametocyte | possibly expressed | 0.44 | 0.75 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1355600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.126 | MFS: -3.05 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IDE6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 5 | 39 | 26 | 43 |
disruptive | 23 | 79 | 32 | 92 |
missense | 22 | 78 | 31 | 86 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 10 | 77 | 32 | 43 |
disruptive | 44 | 144 | 62 | 130 |
missense | 41 | 133 | 52 | 106 |
PlasmoDB Total SNPs: 164
Non-coding: 111 | Synonymous: 28 | Nonsynonymous: 25 | Stop Codon: 0
Protein Length: 562 | Molecular Weight (kDa): 66.219
UniProt ID(s): Q8IDE6
PDB ID(s): None
Isoelectric Point: 10.3
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
28985225 | Disrupting assembly of the inner membrane complex blocks Plasmodium falciparumsexual stage development. | Parkyn Schneider M, Liu B, ..., Dixon MWA | 10.1371/journal.ppat.1006659 |