About Gene List

PF3D7_1355600 (PIP1)

Genome location: Pf3D7_13_v3:2,202,011..2,205,513(-)

Genome classification: Core

Function and Localization

Product Description: PhIL1 interacting protein PIP1

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0070258 inner membrane pellicle complex
Function GO:0005515 protein binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite possibly expressed N/A N/A
Ring not expressed 0.05 0.97
Trophozoite not expressed 0.09 0.95
Schizont not expressed 0.02 0.99
Gametocyte possibly expressed 0.44 0.75

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1355600

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.126 | MFS: -3.05 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IDE6

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532740

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 5 39 26 43
disruptive 23 79 32 92
missense 22 78 31 86

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 10 77 32 43
disruptive 44 144 62 130
missense 41 133 52 106

PlasmoDB Total SNPs: 164

Non-coding: 111 | Synonymous: 28 | Nonsynonymous: 25 | Stop Codon: 0

Protein Information

Protein Length: 562 | Molecular Weight (kDa): 66.219

UniProt ID(s): Q8IDE6

PDB ID(s): None

Isoelectric Point: 10.3

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
28985225 Disrupting assembly of the inner membrane complex blocks Plasmodium falciparumsexual stage development. Parkyn Schneider M, Liu B, ..., Dixon MWA 10.1371/journal.ppat.1006659