Product Description: zinc finger protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.98 |
Trophozoite | possibly expressed | 0.04 | 0.98 |
Schizont | not expressed | 0.47 | 0.73 |
Gametocyte | expressed | 1.89 | 0.39 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1358600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: 1.384 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_1134900)
Modification: Mutated | RMgm-5143
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8I4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 12 | 52 | 27 | 74 |
disruptive | 39 | 190 | 77 | 207 |
missense | 24 | 162 | 64 | 174 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 21 | 112 | 49 | 63 |
disruptive | 83 | 357 | 152 | 287 |
missense | 55 | 293 | 127 | 209 |
PlasmoDB Total SNPs: 116
Non-coding: 0 | Synonymous: 63 | Nonsynonymous: 52 | Stop Codon: 1
Protein Length: 1005 | Molecular Weight (kDa): 118.299
UniProt ID(s): A0A5K1K8I4
PDB ID(s): None
Isoelectric Point: 6.67
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR000571 | Zinc finger, CCCH-type |
InterPro | IPR036855 | Zinc finger, CCCH-type superfamily |
PFam | N/A | N/A |
Superfamily | SSF90229 | Zinc finger, CCCH-type superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |