Genome location: Pf3D7_13_v3:2,395,314..2,402,848(+)
Genome classification: Core
Product Description: quinoxaline resistance protein QRP1
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB):
| Type | GO Term | Name |
|---|---|---|
| Process | GO:0009410 | response to xenobiotic stimulus |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 1.09 | 0.52 |
| Trophozoite | not expressed | 1.11 | 0.47 |
| Schizont | not expressed | 1.49 | 0.33 |
| Gametocyte | not expressed | 1.29 | 0.39 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1359900
Resistome Missense Mutations: G1612V, D1863Y
Resistome Compounds with Missense Mutations: MMV665794
Resistome # Samples with Disruptive Mutations: 6 (5 missense, 2 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.815 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K916
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 18 | 105 | 75 | 166 |
| disruptive | 71 | 274 | 151 | 356 |
| missense | 49 | 244 | 142 | 305 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 36 | 224 | 93 | 155 |
| disruptive | 154 | 536 | 248 | 493 |
| missense | 102 | 458 | 212 | 347 |
PlasmoDB Total SNPs: 317
Non-coding: 114 | Synonymous: 117 | Nonsynonymous: 86 | Stop Codon: 0
Protein Length: 2126 | Molecular Weight (kDa): 249.76
UniProt ID(s): A0A5K1K916
PDB ID(s): None
Isoelectric Point: 9.77
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 37244916 | Generation of a mutator parasite to drive resistome discovery in Plasmodiumfalciparum | Kumpornsin K, Kochakarn T, ..., Lee MCS | 10.1038/s41467-023-38774-1 |