Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 3
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020011 | apicoplast |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.10 | 0.95 |
Trophozoite | possibly expressed | 0.42 | 0.75 |
Schizont | expressed | 0.05 | 0.97 |
Gametocyte | not expressed | 0.51 | 0.71 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1360300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.139 | MFS: -3.007 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1136500)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8P5
"Best" AlphaFill ligand hit: AGS (phosphothiophosphoric acid-adenylate ester, Local RMSD=0.11) with 6HRC (Global RMSD=22.31)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 19 | 11 | 23 |
disruptive | 13 | 52 | 37 | 86 |
missense | 13 | 50 | 37 | 75 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 41 | 15 | 29 |
disruptive | 22 | 140 | 56 | 121 |
missense | 19 | 121 | 47 | 79 |
PlasmoDB Total SNPs: 133
Non-coding: 112 | Synonymous: 6 | Nonsynonymous: 15 | Stop Codon: 0
Protein Length: 372 | Molecular Weight (kDa): 45.561
UniProt ID(s): A0A5K1K8P5
PDB ID(s): None
Isoelectric Point: 9.85
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
30212465 | Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. | Boucher MJ, Ghosh S, ..., Yeh E | 10.1371/journal.pbio.2005895 |