About Gene List

PF3D7_1360300

Genome location: Pf3D7_13_v3:2,408,666..2,410,749(-)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 3

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0020011 apicoplast

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.10 0.95
Trophozoite possibly expressed 0.42 0.75
Schizont expressed 0.05 0.97
Gametocyte not expressed 0.51 0.71

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1360300

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.139 | MFS: -3.007 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1136500)

  • Relative Growth Rate: 0.02 ± 0.03
  • Confidence: 8.37

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: A0A5K1K8P5

"Best" AlphaFill ligand hit: AGS (phosphothiophosphoric acid-adenylate ester, Local RMSD=0.11) with 6HRC (Global RMSD=22.31)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532942

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 19 11 23
disruptive 13 52 37 86
missense 13 50 37 75

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 41 15 29
disruptive 22 140 56 121
missense 19 121 47 79

PlasmoDB Total SNPs: 133

Non-coding: 112 | Synonymous: 6 | Nonsynonymous: 15 | Stop Codon: 0

Protein Information

Protein Length: 372 | Molecular Weight (kDa): 45.561

UniProt ID(s): A0A5K1K8P5

PDB ID(s): None

Isoelectric Point: 9.85

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
30212465 Integrative proteomics and bioinformatic prediction enable a high-confidenceapicoplast proteome in malaria parasites. Boucher MJ, Ghosh S, ..., Yeh E 10.1371/journal.pbio.2005895