Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016020 | membrane |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.03 | 0.98 |
Schizont | not expressed | 0.02 | 0.99 |
Gametocyte | expressed | 1.06 | 0.58 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1361300
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.123 | MFS: -3.105 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1137400)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1137400)
Modification: Disrupted | RMgm-3121
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K918
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 18 | 11 | 20 |
disruptive | 5 | 31 | 17 | 38 |
missense | 5 | 31 | 17 | 37 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 28 | 12 | 24 |
disruptive | 12 | 59 | 22 | 59 |
missense | 12 | 55 | 20 | 49 |
PlasmoDB Total SNPs: 117
Non-coding: 103 | Synonymous: 9 | Nonsynonymous: 5 | Stop Codon: 0
Protein Length: 238 | Molecular Weight (kDa): 28.178
UniProt ID(s): A0A5K1K918
PDB ID(s): None
Isoelectric Point: 9.63
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |