Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005634 | nucleus |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.10 | 0.96 |
Trophozoite | possibly expressed | 0.52 | 0.72 |
Schizont | possibly expressed | 0.45 | 0.74 |
Gametocyte | expressed | 1.52 | 0.34 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1362700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 1 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.065 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H5K2
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 20 | 96 | 46 | 110 |
disruptive | 161 | 449 | 199 | 489 |
missense | 87 | 352 | 161 | 370 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 33 | 179 | 63 | 114 |
disruptive | 292 | 774 | 292 | 575 |
missense | 172 | 582 | 223 | 374 |
PlasmoDB Total SNPs: 1057
Non-coding: 237 | Synonymous: 392 | Nonsynonymous: 428 | Stop Codon: 0
Protein Length: 2039 | Molecular Weight (kDa): 242.24
UniProt ID(s): C0H5K2
PDB ID(s): None
Isoelectric Point: 4.22
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
23181666 | Organellar proteomics reveals hundreds of novel nuclear proteins in the malariaparasite Plasmodium falciparum. | Oehring SC, Woodcroft BJ, ..., Voss TS | 10.1186/gb-2012-13-11-r108 |