Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 2
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0000123 | histone acetyltransferase complex |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.88 | 0.60 |
Trophozoite | possibly expressed | 1.14 | 0.43 |
Schizont | not expressed | 0.76 | 0.58 |
Gametocyte | not expressed | 0.79 | 0.59 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1364400
Resistome Missense Mutations: N2894T
Resistome Compounds with Missense Mutations: Cipargamin/KAE609/NITD609
Resistome # Samples with Disruptive Mutations: 3 (3 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.126 | MFS: -3.128 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1140300)
Modification: Disrupted | RMgm-731
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 33 | 202 | 116 | 190 |
disruptive | 130 | 523 | 263 | 662 |
missense | 89 | 450 | 226 | 537 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 64 | 373 | 146 | 254 |
disruptive | 281 | 1111 | 495 | 1021 |
missense | 182 | 870 | 388 | 616 |
PlasmoDB Total SNPs: 588
Non-coding: 127 | Synonymous: 236 | Nonsynonymous: 225 | Stop Codon: 0
Protein Length: 3265 | Molecular Weight (kDa): 386.33
UniProt ID(s): A0A5K1K8L4
PDB ID(s): None
Isoelectric Point: 8.78
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR036915 | Cyclin-like superfamily |
PFam | N/A | N/A |
Superfamily | SSF47954 | Cyclin-like superfamily |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |
34403450 | A unique GCN5 histone acetyltransferase complex controls erythrocyte invasion andvirulence in the malaria parasite Plasmodium falciparum. | Miao J, Wang C, ..., Cui L | 10.1371/journal.ppat.1009351 |