Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 0.22 | 0.89 |
| Trophozoite | expressed | 0.34 | 0.80 |
| Schizont | possibly expressed | 0.07 | 0.95 |
| Gametocyte | expressed | 0.46 | 0.74 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1365000
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.3 | MFS: -2.627 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K8X0
"Best" AlphaFill ligand hit: LVV (4-[(4-methylphenyl)methyl]-1,4-thiazinane 1,1-dioxide, Local RMSD=0.07) with 5S66 (Global RMSD=22.35)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 5 | 20 | 6 | 23 |
| disruptive | 3 | 75 | 38 | 72 |
| missense | 3 | 72 | 38 | 71 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 6 | 41 | 16 | 20 |
| disruptive | 16 | 142 | 59 | 96 |
| missense | 9 | 133 | 54 | 84 |
PlasmoDB Total SNPs: 59
Non-coding: 27 | Synonymous: 16 | Nonsynonymous: 16 | Stop Codon: 0
Protein Length: 348 | Molecular Weight (kDa): 42.221
UniProt ID(s): A0A5K1K8X0
PDB ID(s): None
Isoelectric Point: 9.59
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |