Genome location: Pf3D7_13_v3:2,654,471..2,660,689(-)
Genome classification: Core
Product Description: rhoptry protein RHOP148
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0020008 | rhoptry |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.38 | 0.82 |
Trophozoite | expressed | 1.07 | 0.46 |
Schizont | expressed | 0.37 | 0.78 |
Gametocyte | expressed | 0.54 | 0.69 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1366400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.133 | MFS: -2.943 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1142300)
Modification: Disrupted | RMgm-3144
More info: PhenoPlasm Link
AlphaFill Uniprot ID: A0A5K1K9G4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 89 | 46 | 92 |
disruptive | 92 | 246 | 121 | 224 |
missense | 42 | 169 | 90 | 166 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 35 | 177 | 56 | 93 |
disruptive | 159 | 434 | 162 | 401 |
missense | 73 | 316 | 117 | 242 |
PlasmoDB Total SNPs: 453
Non-coding: 191 | Synonymous: 137 | Nonsynonymous: 125 | Stop Codon: 0
Protein Length: 1262 | Molecular Weight (kDa): 148.755
UniProt ID(s): A0A5K1K9G4, C5HEX8, C5HEY0, C5HEY1, C5HEY2, C5HEY3, C5HEY4, C5HEY5, C5HEY6, C5HEZ2, Q868L5
PDB ID(s): None
Isoelectric Point: 8.72
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12706797 | Characterization of PfRhop148, a novel rhoptry protein of Plasmodium falciparum. | Lobo CA, Rodriguez M, ..., Lustigman S | 10.1016/s0166-6851(03)00050-1 |
16267556 | A protein interaction network of the malaria parasite Plasmodium falciparum. | LaCount DJ, Vignali M, ..., Hughes RE | 10.1038/nature04104 |