Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.01 | 1.00 |
| Trophozoite | not expressed | 0.02 | 0.99 |
| Schizont | not expressed | 0.02 | 0.99 |
| Gametocyte | not expressed | 0.04 | 0.97 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1367900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.648 | #Insertions: 3
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Not tested (Pb ortholog: PBANKA_1143800)
Modification: Disrupted | RMgm-1295
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C0H5L1
"Best" AlphaFill ligand hit: OPE (phosphoric acid mono-(2-amino-ethyl) ester, Local RMSD=0.37) with 3UJB (Global RMSD=26.42)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 5 | 25 | 21 | 40 |
| disruptive | 22 | 100 | 58 | 129 |
| missense | 20 | 92 | 53 | 114 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 8 | 51 | 28 | 43 |
| disruptive | 41 | 205 | 88 | 207 |
| missense | 33 | 176 | 76 | 142 |
PlasmoDB Total SNPs: 51
Non-coding: 0 | Synonymous: 32 | Nonsynonymous: 19 | Stop Codon: 0
Protein Length: 647 | Molecular Weight (kDa): 77.874
UniProt ID(s): C0H5L1
PDB ID(s): None
Isoelectric Point: 6.71
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
No associated publications