About Gene List

PF3D7_1369400

Genome location: Pf3D7_13_v3:2,759,048..2,768,913(+)

Genome classification: Core

Function and Localization

Product Description: conserved Plasmodium protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 3

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Component GO:0016020 membrane

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.20 0.90
Trophozoite expressed 0.66 0.63
Schizont possibly expressed 0.28 0.83
Gametocyte not expressed 0.65 0.66

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1369400

Resistome Missense Mutations: R198I

Resistome Compounds with Missense Mutations: Suloctidil

Resistome # Samples with Disruptive Mutations: 2 (2 missense, 2 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.136 | MFS: -3.177 | #Insertions: 0

PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1145300)

  • Relative Growth Rate: 0.10 ± nan
  • Confidence: 1.00

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: N/A

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532573

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 25 180 77 191
disruptive 116 557 301 584
missense 102 534 287 522

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 52 314 129 191
disruptive 205 1101 414 853
missense 180 977 366 608

PlasmoDB Total SNPs: 359

Non-coding: 50 | Synonymous: 142 | Nonsynonymous: 166 | Stop Codon: 1

Protein Information

Protein Length: 2868 | Molecular Weight (kDa): 346.811

UniProt ID(s): C0H5L6

PDB ID(s): None

Isoelectric Point: 7.31

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315