Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 3
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0016020 | membrane |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.20 | 0.90 |
Trophozoite | expressed | 0.66 | 0.63 |
Schizont | possibly expressed | 0.28 | 0.83 |
Gametocyte | not expressed | 0.65 | 0.66 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1369400
Resistome Missense Mutations: R198I
Resistome Compounds with Missense Mutations: Suloctidil
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 2 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.136 | MFS: -3.177 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1145300)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 25 | 180 | 77 | 191 |
disruptive | 116 | 557 | 301 | 584 |
missense | 102 | 534 | 287 | 522 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 52 | 314 | 129 | 191 |
disruptive | 205 | 1101 | 414 | 853 |
missense | 180 | 977 | 366 | 608 |
PlasmoDB Total SNPs: 359
Non-coding: 50 | Synonymous: 142 | Nonsynonymous: 166 | Stop Codon: 1
Protein Length: 2868 | Molecular Weight (kDa): 346.811
UniProt ID(s): C0H5L6
PDB ID(s): None
Isoelectric Point: 7.31
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |