Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.01 | 1.00 |
Trophozoite | not expressed | 0.01 | 1.00 |
Schizont | not expressed | 0.00 | 1.00 |
Gametocyte | not expressed | 0.41 | 0.79 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1408800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.981 | MFS: -2.954 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IM08
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 23 | 7 | 21 |
disruptive | 10 | 28 | 12 | 49 |
missense | 7 | 28 | 12 | 39 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 6 | 40 | 14 | 19 |
disruptive | 20 | 71 | 36 | 65 |
missense | 12 | 60 | 27 | 46 |
PlasmoDB Total SNPs: 73
Non-coding: 53 | Synonymous: 12 | Nonsynonymous: 8 | Stop Codon: 0
Protein Length: 297 | Molecular Weight (kDa): 34.895
UniProt ID(s): Q8IM08
PDB ID(s): None
Isoelectric Point: 9.77
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |