About Gene List

PF3D7_1413700

Genome location: Pf3D7_14_v3:540,168..546,533(-)

Genome classification: Core

Function and Localization

Product Description: DET1 domain-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.58 0.79
Trophozoite expressed 0.26 0.85
Schizont expressed 0.74 0.65
Gametocyte not expressed 0.15 0.92

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1413700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.229 | MFS: -2.746 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8ILV8

"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=0.67) with 6JWQ (Global RMSD=40.44)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533687

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 7 60 30 74
disruptive 55 195 105 261
missense 27 166 98 235

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 13 128 50 93
disruptive 114 412 206 374
missense 54 350 173 288

PlasmoDB Total SNPs: 440

Non-coding: 236 | Synonymous: 68 | Nonsynonymous: 134 | Stop Codon: 2

Protein Information

Protein Length: 1213 | Molecular Weight (kDa): 145.003

UniProt ID(s): Q8ILV8

PDB ID(s): None

Isoelectric Point: 9.37

Protein Domain Annotations:

Source Family ID Description
InterPro IPR019138 De-etiolated protein 1, Det1
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097