Product Description: DET1 domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.58 | 0.79 |
Trophozoite | expressed | 0.26 | 0.85 |
Schizont | expressed | 0.74 | 0.65 |
Gametocyte | not expressed | 0.15 | 0.92 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1413700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.229 | MFS: -2.746 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILV8
"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=0.67) with 6JWQ (Global RMSD=40.44)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 60 | 30 | 74 |
disruptive | 55 | 195 | 105 | 261 |
missense | 27 | 166 | 98 | 235 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 13 | 128 | 50 | 93 |
disruptive | 114 | 412 | 206 | 374 |
missense | 54 | 350 | 173 | 288 |
PlasmoDB Total SNPs: 440
Non-coding: 236 | Synonymous: 68 | Nonsynonymous: 134 | Stop Codon: 2
Protein Length: 1213 | Molecular Weight (kDa): 145.003
UniProt ID(s): Q8ILV8
PDB ID(s): None
Isoelectric Point: 9.37
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR019138 | De-etiolated protein 1, Det1 |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |