About Gene List

PF3D7_1414100

Genome location: Pf3D7_14_v3:557,487..562,812(+)

Genome classification: Core

Function and Localization

Product Description: zinc finger protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite expressed N/A N/A
Ring expressed 0.44 0.78
Trophozoite expressed 0.23 0.86
Schizont expressed 0.12 0.92
Gametocyte expressed 0.17 0.90

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1414100

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.203 | MFS: -2.875 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8ILV4

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_533605

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 12 47 23 47
disruptive 55 134 55 143
missense 27 100 44 118

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 21 82 37 76
disruptive 86 276 116 296
missense 41 213 91 180

PlasmoDB Total SNPs: 421

Non-coding: 303 | Synonymous: 69 | Nonsynonymous: 48 | Stop Codon: 1

Protein Information

Protein Length: 743 | Molecular Weight (kDa): 85.74

UniProt ID(s): Q8ILV4

PDB ID(s): None

Isoelectric Point: 9.39

Protein Domain Annotations:

Source Family ID Description
InterPro IPR025829 Zinc knuckle CX2CX3GHX4C
InterPro IPR033489 E3 ubiquitin-protein ligase RBBP6 family
PFam PF13696 Zinc knuckle CX2CX3GHX4C
Superfamily SSF57850 N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097