Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.04 | 0.98 |
Trophozoite | not expressed | 0.12 | 0.94 |
Schizont | not expressed | 0.29 | 0.85 |
Gametocyte | not expressed | 0.80 | 0.60 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1416600
Resistome Missense Mutations: M2760I
Resistome Compounds with Missense Mutations: Lopinavir
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 1 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -1.037 | #Insertions: 12
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 22 | 135 | 90 | 201 |
disruptive | 86 | 461 | 284 | 651 |
missense | 73 | 438 | 269 | 593 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 38 | 278 | 145 | 211 |
disruptive | 190 | 950 | 471 | 758 |
missense | 142 | 848 | 427 | 620 |
PlasmoDB Total SNPs: 317
Non-coding: 83 | Synonymous: 113 | Nonsynonymous: 120 | Stop Codon: 1
Protein Length: 3026 | Molecular Weight (kDa): 357.636
UniProt ID(s): Q8ILS9
PDB ID(s): None
Isoelectric Point: 9.31
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |