Product Description: conserved Plasmodium membrane protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 4
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | possibly expressed | 1.47 | 0.39 |
| Trophozoite | not expressed | 1.08 | 0.46 |
| Schizont | not expressed | 0.39 | 0.77 |
| Gametocyte | not expressed | 0.83 | 0.56 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1419400
Resistome Missense Mutations: D59Y
Resistome Compounds with Missense Mutations: Suloctidil
Resistome # Samples with Disruptive Mutations: 1 (1 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.322 | #Insertions: 7
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILQ6
"Best" AlphaFill ligand hit: 1PG (2-(2-{2-[2-(2-methoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethanol, Local RMSD=0.71) with 5FRE (Global RMSD=38.14)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 22 | 114 | 49 | 129 |
| disruptive | 71 | 299 | 194 | 459 |
| missense | 40 | 256 | 173 | 389 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 42 | 198 | 83 | 149 |
| disruptive | 159 | 677 | 321 | 618 |
| missense | 85 | 559 | 273 | 443 |
PlasmoDB Total SNPs: 423
Non-coding: 189 | Synonymous: 140 | Nonsynonymous: 94 | Stop Codon: 0
Protein Length: 2201 | Molecular Weight (kDa): 262.309
UniProt ID(s): Q8ILQ6
PDB ID(s): None
Isoelectric Point: 6.75
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |