About Gene List

PF3D7_1422300

Genome location: Pf3D7_14_v3:897,267..899,556(-)

Genome classification: Core

Function and Localization

Product Description: DnaJ protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring possibly expressed 0.26 0.87
Trophozoite possibly expressed 0.41 0.76
Schizont expressed 0.16 0.89
Gametocyte expressed 0.85 0.55

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1422300

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.168 | MFS: -3.269 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: C6S3I0

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532515

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 4 15 12 20
disruptive 10 36 22 55
missense 6 23 15 36

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 5 39 15 24
disruptive 31 101 55 115
missense 15 57 36 62

PlasmoDB Total SNPs: 193

Non-coding: 157 | Synonymous: 22 | Nonsynonymous: 14 | Stop Codon: 0

Protein Information

Protein Length: 354 | Molecular Weight (kDa): 42.591

UniProt ID(s): C6S3I0

PDB ID(s): None

Isoelectric Point: 10.13

Protein Domain Annotations:

Source Family ID Description
InterPro IPR001623 DnaJ domain
InterPro IPR018253 DnaJ domain, conserved site
InterPro IPR036869 Chaperone J-domain superfamily
PFam PF00226 DnaJ domain
Superfamily SSF46565 Chaperone J-domain superfamily

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097