Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.00 | 1.00 |
Trophozoite | not expressed | 0.01 | 0.99 |
Schizont | not expressed | 0.02 | 0.98 |
Gametocyte | expressed | 0.74 | 0.62 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1425500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.301 | #Insertions: 5
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1019000)
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1019000)
Modification: Disrupted | RMgm-2810
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILK8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_106500
Most Similar Human Ortholog: A6NNX1
TM-align score: 0.49 | RMSD: 2.99
Seq Identity: 0.23 | Length: 60 / 175
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000178796 | regulatory subunit of type II PKA R-subunit domain containing 1 |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 9 | 2 | 10 |
disruptive | 4 | 10 | 11 | 30 |
missense | 4 | 10 | 10 | 26 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 19 | 5 | 9 |
disruptive | 7 | 30 | 19 | 40 |
missense | 6 | 23 | 16 | 28 |
PlasmoDB Total SNPs: 66
Non-coding: 61 | Synonymous: 3 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 175 | Molecular Weight (kDa): 21.337
UniProt ID(s): Q8ILK8
PDB ID(s): None
Isoelectric Point: 6.88
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | SSF47391 | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |