Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | expressed | 1.50 | 0.40 |
| Trophozoite | expressed | 0.93 | 0.52 |
| Schizont | expressed | 0.33 | 0.81 |
| Gametocyte | not expressed | 0.89 | 0.56 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1426800
Resistome Missense Mutations: Q699H
Resistome Compounds with Missense Mutations: MMV982556
Resistome # Samples with Disruptive Mutations: 2 (2 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.13 | MFS: -2.881 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILJ6
"Best" AlphaFill ligand hit: U5P (uridine-5'-monophosphate, Local RMSD=0.07) with 6DSR (Global RMSD=24.18)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 27 | 82 | 40 | 95 |
| disruptive | 90 | 255 | 152 | 340 |
| missense | 51 | 151 | 92 | 233 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 50 | 156 | 75 | 128 |
| disruptive | 199 | 640 | 296 | 693 |
| missense | 90 | 371 | 204 | 355 |
PlasmoDB Total SNPs: 404
Non-coding: 112 | Synonymous: 166 | Nonsynonymous: 126 | Stop Codon: 0
Protein Length: 2082 | Molecular Weight (kDa): 248.503
UniProt ID(s): Q8ILJ6
PDB ID(s): None
Isoelectric Point: 9.23
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |