Genome location: Pf3D7_14_v3:1,061,328..1,063,299(+)
Genome classification: Core
Product Description: selenoprotein 4, selenoprotein 4, putative
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005783 | endoplasmic reticulum |
Process | GO:0045454 | cell redox homeostasis |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.14 | 0.93 |
Trophozoite | not expressed | 0.16 | 0.90 |
Schizont | not expressed | 0.42 | 0.74 |
Gametocyte | not expressed | 0.19 | 0.88 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1427200
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.364 | MFS: -1.998 | #Insertions: 1
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: N/A
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
No passing variants found
PlasmoDB Total SNPs: 97
Non-coding: 91 | Synonymous: 4 | Nonsynonymous: 2 | Stop Codon: 0
Protein Length: 134 | Molecular Weight (kDa): 16.127
UniProt ID(s): Q8ILJ2
PDB ID(s): None
Isoelectric Point: 10.5
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
16428245 | The Plasmodium selenoproteome. | Lobanov AV, Delgado C, ..., Gladyshev VN | 10.1093/nar/gkj450 |
22229886 | Insight into the selenoproteome of the malaria parasite Plasmodium falciparum. | Roseler A, Prieto JH, ..., Becker K | 10.1089/ars.2011.4276 |