Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.11 | 0.95 |
Trophozoite | expressed | 0.86 | 0.55 |
Schizont | expressed | 0.39 | 0.78 |
Gametocyte | expressed | 0.54 | 0.70 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1428900
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.128 | MFS: -2.844 | #Insertions: 0
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1015800)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILH5
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 15 | 51 | 27 | 73 |
disruptive | 43 | 155 | 71 | 152 |
missense | 16 | 112 | 60 | 113 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 26 | 109 | 54 | 74 |
disruptive | 84 | 301 | 145 | 343 |
missense | 36 | 209 | 102 | 220 |
PlasmoDB Total SNPs: 241
Non-coding: 50 | Synonymous: 112 | Nonsynonymous: 78 | Stop Codon: 1
Protein Length: 1445 | Molecular Weight (kDa): 172.15
UniProt ID(s): Q8ILH5
PDB ID(s): None
Isoelectric Point: 6.08
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |