Product Description: HP12 protein homolog, putative
SignalP Peptide: N/A
# Transmembrane Domains: 1
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Component | GO:0005802 | trans-Golgi network |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | expressed | 0.21 | 0.89 |
Trophozoite | expressed | 0.85 | 0.55 |
Schizont | expressed | 0.46 | 0.72 |
Gametocyte | expressed | 0.55 | 0.69 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1432800
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 3 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.194 | MFS: -2.63 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: Different from wild type (Pb ortholog: PBANKA_1012100)
Modification: Disrupted | RMgm-2768
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8ILD4
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 27 | 15 | 33 |
disruptive | 27 | 77 | 49 | 130 |
missense | 13 | 61 | 44 | 111 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 10 | 52 | 27 | 51 |
disruptive | 52 | 184 | 101 | 173 |
missense | 29 | 144 | 89 | 143 |
PlasmoDB Total SNPs: 148
Non-coding: 80 | Synonymous: 28 | Nonsynonymous: 40 | Stop Codon: 0
Protein Length: 733 | Molecular Weight (kDa): 85.708
UniProt ID(s): Q8ILD4
PDB ID(s): None
Isoelectric Point: 6.78
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR031615 | MYND-like zinc finger, mRNA-binding |
PFam | PF15801 | MYND-like zinc finger, mRNA-binding |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |