Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | possibly expressed | N/A | N/A |
Ring | expressed | 0.18 | 0.91 |
Trophozoite | expressed | 0.25 | 0.85 |
Schizont | expressed | 0.05 | 0.97 |
Gametocyte | expressed | 0.40 | 0.78 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1436400
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 0.926 | MFS: -2.64 | #Insertions: 1
PlasmoGEM Phenotype: Essential (Pb ortholog: PBANKA_1008400)
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: C6S3I5
"Best" AlphaFill ligand hit: ATP (adenosine-5'-triphosphate, Local RMSD=0.14) with 6CTA (Global RMSD=14.45)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 58 | 29 | 61 |
disruptive | 36 | 165 | 103 | 224 |
missense | 23 | 148 | 93 | 203 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 19 | 100 | 47 | 67 |
disruptive | 64 | 359 | 138 | 280 |
missense | 40 | 296 | 126 | 213 |
PlasmoDB Total SNPs: 143
Non-coding: 56 | Synonymous: 54 | Nonsynonymous: 33 | Stop Codon: 0
Protein Length: 1264 | Molecular Weight (kDa): 153.329
UniProt ID(s): C6S3I5
PDB ID(s): None
Isoelectric Point: 9.21
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |