Product Description: YrhK domain-containing protein, putative
SignalP Peptide: N/A
# Transmembrane Domains: 6
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.05 | 0.97 |
Trophozoite | not expressed | 0.13 | 0.91 |
Schizont | possibly expressed | 0.15 | 0.88 |
Gametocyte | possibly expressed | 0.08 | 0.95 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1437500
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS *tentative
MIS: 1 | MFS: -1.662 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IL91
"Best" AlphaFill ligand hit: HEX (hexane, Local RMSD=0.12) with 6JO0 (Global RMSD=17.59)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 1 | 20 | 4 | 16 |
disruptive | 8 | 26 | 21 | 43 |
missense | 8 | 26 | 20 | 38 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 28 | 17 | 23 |
disruptive | 18 | 71 | 28 | 54 |
missense | 14 | 53 | 26 | 47 |
PlasmoDB Total SNPs: 14
Non-coding: 0 | Synonymous: 6 | Nonsynonymous: 8 | Stop Codon: 0
Protein Length: 271 | Molecular Weight (kDa): 30.805
UniProt ID(s): Q8IL91
PDB ID(s): None
Isoelectric Point: 8.32
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR025424 | YrhK domain |
PFam | PF14145 | YrhK domain |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
11152613 | Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. | Krogh A, Larsson B, von Heijne G, Sonnhammer EL | 10.1006/jmbi.2000.4315 |
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |