About Gene List

PF3D7_1437500

Genome location: Pf3D7_14_v3:1,521,105..1,521,920(+)

Genome classification: Core

Function and Localization

Product Description: YrhK domain-containing protein, putative

SignalP Peptide: N/A

# Transmembrane Domains: 6

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.05 0.97
Trophozoite not expressed 0.13 0.91
Schizont possibly expressed 0.15 0.88
Gametocyte possibly expressed 0.08 0.95

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1437500

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS *tentative

MIS: 1 | MFS: -1.662 | #Insertions: 0

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IL91

"Best" AlphaFill ligand hit: HEX (hexane, Local RMSD=0.12) with 6JO0 (Global RMSD=17.59)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_532461

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 1 20 4 16
disruptive 8 26 21 43
missense 8 26 20 38

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 28 17 23
disruptive 18 71 28 54
missense 14 53 26 47

PlasmoDB Total SNPs: 14

Non-coding: 0 | Synonymous: 6 | Nonsynonymous: 8 | Stop Codon: 0

Protein Information

Protein Length: 271 | Molecular Weight (kDa): 30.805

UniProt ID(s): Q8IL91

PDB ID(s): None

Isoelectric Point: 8.32

Protein Domain Annotations:

Source Family ID Description
InterPro IPR025424 YrhK domain
PFam PF14145 YrhK domain
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
11152613 Predicting transmembrane protein topology with a hidden Markov model: applicationto complete genomes. Krogh A, Larsson B, von Heijne G, Sonnhammer EL 10.1006/jmbi.2000.4315
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097