About Gene List

PF3D7_1441600

Genome location: Pf3D7_14_v3:1,696,250..1,698,728(-)

Genome classification: Core

Function and Localization

Product Description: acid cluster protein 33 homologue, putative

SignalP Peptide: N/A

# Transmembrane Domains: 0

EC Numbers: None

Curated GO (PlasmoDB): None

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.02 0.99
Trophozoite not expressed 0.08 0.94
Schizont not expressed 0.13 0.90
Gametocyte not expressed 0.16 0.90

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1441600

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Mutable in CDS

MIS: 1 | MFS: -0.496 | #Insertions: 2

PlasmoGEM Phenotype: N/A

RMgmDB ABS Phenotype: N/A

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IL54

"Best" AlphaFill ligand hit: PPI (propanoic acid, Local RMSD=0.83) with 1UK6 (Global RMSD=2.54)

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_105553

Most Similar Human Ortholog: H0YMB7

TM-align score: 0.88 | RMSD: 1.31

Seq Identity: 0.37 | Length: 133 / 569

All Human Orthologs (OrthoMCL):

Gene ID Description
ENSG00000090487 SPG21 abhydrolase domain containing, maspardin

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 8 45 14 38
disruptive 12 71 32 86
missense 11 65 31 77

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 18 64 27 47
disruptive 26 156 68 153
missense 22 137 51 98

PlasmoDB Total SNPs: 99

Non-coding: 67 | Synonymous: 20 | Nonsynonymous: 11 | Stop Codon: 1

Protein Information

Protein Length: 569 | Molecular Weight (kDa): 67.622

UniProt ID(s): Q8IL54

PDB ID(s): None

Isoelectric Point: 6.88

Protein Domain Annotations:

Source Family ID Description
InterPro IPR000073 Alpha/beta hydrolase fold-1
InterPro IPR026151 Maspardin
InterPro IPR029058 Alpha/Beta hydrolase fold
PFam PF00561 Alpha/beta hydrolase fold-1
Superfamily SSF53474 Alpha/Beta hydrolase fold

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097