Product Description: acid cluster protein 33 homologue, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.02 | 0.99 |
Trophozoite | not expressed | 0.08 | 0.94 |
Schizont | not expressed | 0.13 | 0.90 |
Gametocyte | not expressed | 0.16 | 0.90 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1441600
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -0.496 | #Insertions: 2
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IL54
"Best" AlphaFill ligand hit: PPI (propanoic acid, Local RMSD=0.83) with 1UK6 (Global RMSD=2.54)
No associated EC numbersNo evidence of orthology to BindingDB entries
Ortholog Group (OrthoMCL): OG6_105553
Most Similar Human Ortholog: H0YMB7
TM-align score: 0.88 | RMSD: 1.31
Seq Identity: 0.37 | Length: 133 / 569
All Human Orthologs (OrthoMCL):
Gene ID | Description |
---|---|
ENSG00000090487 | SPG21 abhydrolase domain containing, maspardin |
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 8 | 45 | 14 | 38 |
disruptive | 12 | 71 | 32 | 86 |
missense | 11 | 65 | 31 | 77 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 18 | 64 | 27 | 47 |
disruptive | 26 | 156 | 68 | 153 |
missense | 22 | 137 | 51 | 98 |
PlasmoDB Total SNPs: 99
Non-coding: 67 | Synonymous: 20 | Nonsynonymous: 11 | Stop Codon: 1
Protein Length: 569 | Molecular Weight (kDa): 67.622
UniProt ID(s): Q8IL54
PDB ID(s): None
Isoelectric Point: 6.88
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR000073 | Alpha/beta hydrolase fold-1 |
InterPro | IPR026151 | Maspardin |
InterPro | IPR029058 | Alpha/Beta hydrolase fold |
PFam | PF00561 | Alpha/beta hydrolase fold-1 |
Superfamily | SSF53474 | Alpha/Beta hydrolase fold |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |