Product Description: conserved Plasmodium protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
| Stage | LR class | MCA mean | MCA prop. zeros |
|---|---|---|---|
| Sporozoite | not expressed | N/A | N/A |
| Ring | not expressed | 0.10 | 0.95 |
| Trophozoite | possibly expressed | 0.79 | 0.60 |
| Schizont | expressed | 0.66 | 0.66 |
| Gametocyte | not expressed | 1.00 | 0.50 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1442700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Mutable in CDS
MIS: 1 | MFS: -2.505 | #Insertions: 4
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IL44
"Best" AlphaFill ligand hit: RHQ (rhodamine 6g, Local RMSD=2.56) with 3BR5 (Global RMSD=42.67)
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 20 | 105 | 66 | 170 |
| disruptive | 103 | 466 | 254 | 603 |
| missense | 91 | 438 | 245 | 541 |
Any inclusion in genotype call
| variant type | common | rare | doubleton | singleton |
|---|---|---|---|---|
| synonymous | 33 | 226 | 106 | 187 |
| disruptive | 202 | 882 | 383 | 653 |
| missense | 155 | 807 | 350 | 544 |
PlasmoDB Total SNPs: 273
Non-coding: 42 | Synonymous: 100 | Nonsynonymous: 128 | Stop Codon: 3
Protein Length: 2511 | Molecular Weight (kDa): 300.98
UniProt ID(s): Q8IL44
PDB ID(s): None
Isoelectric Point: 9.62
Protein Domain Annotations:
| Source | Family ID | Description |
|---|---|---|
| InterPro | N/A | N/A |
| PFam | N/A | N/A |
| Superfamily | N/A | N/A |
| PMID | Title | Authors | DOI/Link |
|---|---|---|---|
| 12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |