About Gene List

PF3D7_1447700

Genome location: Pf3D7_14_v3:1,943,918..1,945,580(-)

Genome classification: Core

Function and Localization

Product Description: conserved protein, unknown function

SignalP Peptide: N/A

# Transmembrane Domains: 3

EC Numbers: None

Curated GO (PlasmoDB):

Type GO Term Name
Function GO:0003723 RNA binding

Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):

Stage LR class MCA mean MCA prop. zeros
Sporozoite not expressed N/A N/A
Ring not expressed 0.04 0.98
Trophozoite possibly expressed 0.20 0.87
Schizont not expressed 0.14 0.90
Gametocyte possibly expressed 0.08 0.95

More info:

Resistome Mutations

Old (Pf3D7v3) Gene ID: PF3D7_1447700

Resistome Missense Mutations: None

Resistome Compounds with Missense Mutations: None

Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)

Essentiality (ABS)

Zhang Phenotype: Non - Mutable in CDS

MIS: 0.122 | MFS: -3.051 | #Insertions: 0

PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1311500)

  • Relative Growth Rate: 0.99 ± 0.14
  • Confidence: 5.39

RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_1311500)

Modification: Disrupted | RMgm-4629

More info: PhenoPlasm Link

Binding Evidence

AlphaFill Uniprot ID: Q8IKZ8

"Best" AlphaFill ligand hit: No AlphaFill hits

No associated EC numbers

No evidence of orthology to BindingDB entries

Orthology Information

Ortholog Group (OrthoMCL): OG6_108921

No human ortholog(s)

Genetic Variation

MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:

Homozygous genotype calls only

variant type common rare doubleton singleton
synonymous 2 17 10 26
disruptive 2 20 12 24
missense 2 20 12 21

Any inclusion in genotype call

variant type common rare doubleton singleton
synonymous 4 38 15 32
disruptive 6 45 31 49
missense 5 33 26 32

PlasmoDB Total SNPs: 107

Non-coding: 77 | Synonymous: 25 | Nonsynonymous: 5 | Stop Codon: 0

Protein Information

Protein Length: 342 | Molecular Weight (kDa): 40.695

UniProt ID(s): Q8IKZ8

PDB ID(s): None

Isoelectric Point: 9.93

Protein Domain Annotations:

Source Family ID Description
InterPro N/A N/A
PFam N/A N/A
Superfamily N/A N/A

Associated Publications

PMID Title Authors DOI/Link
12368864 Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, Hall N, ..., Barrell B 10.1038/nature01097
33906926 Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH Sinha A, Baumgarten S, ..., Scherf A 10.1128/mBio.00661-21