Product Description: conserved protein, unknown function
SignalP Peptide: N/A
# Transmembrane Domains: 3
EC Numbers: None
Curated GO (PlasmoDB):
Type | GO Term | Name |
---|---|---|
Function | GO:0003723 | RNA binding |
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | not expressed | 0.04 | 0.98 |
Trophozoite | possibly expressed | 0.20 | 0.87 |
Schizont | not expressed | 0.14 | 0.90 |
Gametocyte | possibly expressed | 0.08 | 0.95 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1447700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.122 | MFS: -3.051 | #Insertions: 0
PlasmoGEM Phenotype: Dispensable (Pb ortholog: PBANKA_1311500)
RMgmDB ABS Phenotype: Not different from wild type (Pb ortholog: PBANKA_1311500)
Modification: Disrupted | RMgm-4629
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKZ8
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 17 | 10 | 26 |
disruptive | 2 | 20 | 12 | 24 |
missense | 2 | 20 | 12 | 21 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 4 | 38 | 15 | 32 |
disruptive | 6 | 45 | 31 | 49 |
missense | 5 | 33 | 26 | 32 |
PlasmoDB Total SNPs: 107
Non-coding: 77 | Synonymous: 25 | Nonsynonymous: 5 | Stop Codon: 0
Protein Length: 342 | Molecular Weight (kDa): 40.695
UniProt ID(s): Q8IKZ8
PDB ID(s): None
Isoelectric Point: 9.93
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | N/A | N/A |
PFam | N/A | N/A |
Superfamily | N/A | N/A |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |
33906926 | Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH | Sinha A, Baumgarten S, ..., Scherf A | 10.1128/mBio.00661-21 |