Product Description: HSP20-like chaperone, putative
SignalP Peptide: N/A
# Transmembrane Domains: 0
EC Numbers: None
Curated GO (PlasmoDB): None
Expression by stage (LR - Le Roch et al., and MCA - Malaria Cell Atlas):
Stage | LR class | MCA mean | MCA prop. zeros |
---|---|---|---|
Sporozoite | not expressed | N/A | N/A |
Ring | possibly expressed | 0.14 | 0.93 |
Trophozoite | possibly expressed | 0.15 | 0.91 |
Schizont | possibly expressed | 0.04 | 0.97 |
Gametocyte | expressed | 0.16 | 0.90 |
More info:
Old (Pf3D7v3) Gene ID: PF3D7_1448700
Resistome Missense Mutations: None
Resistome Compounds with Missense Mutations: None
Resistome # Samples with Disruptive Mutations: 0 (0 missense, 0 "interesting" missense)
Zhang Phenotype: Non - Mutable in CDS
MIS: 0.125 | MFS: -3.121 | #Insertions: 0
PlasmoGEM Phenotype: N/A
RMgmDB ABS Phenotype: N/A
More info: PhenoPlasm Link
AlphaFill Uniprot ID: Q8IKY6
"Best" AlphaFill ligand hit: No AlphaFill hits
No associated EC numbersNo evidence of orthology to BindingDB entries
MalariaGEN Pf7 (worldwide samples) # unique SNV/indels:
Homozygous genotype calls only
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 2 | 16 | 10 | 21 |
disruptive | 14 | 58 | 35 | 81 |
missense | 12 | 54 | 33 | 68 |
Any inclusion in genotype call
variant type | common | rare | doubleton | singleton |
---|---|---|---|---|
synonymous | 7 | 37 | 10 | 21 |
disruptive | 28 | 121 | 56 | 122 |
missense | 23 | 109 | 47 | 69 |
PlasmoDB Total SNPs: 126
Non-coding: 86 | Synonymous: 21 | Nonsynonymous: 19 | Stop Codon: 0
Protein Length: 333 | Molecular Weight (kDa): 39.461
UniProt ID(s): Q8IKY6
PDB ID(s): None
Isoelectric Point: 7.5
Protein Domain Annotations:
Source | Family ID | Description |
---|---|---|
InterPro | IPR008978 | HSP20-like chaperone |
PFam | N/A | N/A |
Superfamily | SSF49764 | HSP20-like chaperone |
PMID | Title | Authors | DOI/Link |
---|---|---|---|
12368864 | Genome sequence of the human malaria parasite Plasmodium falciparum. | Gardner MJ, Hall N, ..., Barrell B | 10.1038/nature01097 |